Pseudomonas mendocina NK-01, MDS_3025

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_3025
Name
Replicon chromosome
Genomic location 3332395 - 3333438 (- strand)

Cross-References

RefSeq YP_004380808.1
GI 330503939
Entrez 10457807
INSDC AEB59056.1
NCBI Locus Tag MDS_3025
UniParc UPI000206D9B5
UniProtKB Acc F4DL58
UniProtKB ID F4DL58_PSEMN
UniRef100 UniRef100_F4DL58
UniRef50 UniRef50_Q4KGB9
UniRef90 UniRef90_A4XTC3

Product

Feature Type CDS
Coding Frame 1
Product Name
AraC family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 2.53
Kyte-Doolittle Hydrophobicity Value -0.262
Molecular Weight (kDa) 39084.1
Isoelectric Point (pI) 7.91

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 216 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002400 (494 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_3025

Human Homologs

References

No references are associated with this feature.