Pseudomonas mendocina NK-01, MDS_3185

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_3185
Name
Replicon chromosome
Genomic location 3520117 - 3521277 (+ strand)

Cross-References

RefSeq YP_004380968.1
GI 330504099
Entrez 10457967
INSDC AEB59216.1
NCBI Locus Tag MDS_3185
UniParc UPI000206DDB4
UniProtKB Acc F4DMY3
UniProtKB ID F4DMY3_PSEMN
UniRef100 UniRef100_F4DMY3
UniRef50 UniRef50_A4XU57
UniRef90 UniRef90_F4DVQ4

Product

Feature Type CDS
Coding Frame 1
Product Name
zonular occludens toxin
Synonyms
Evidence for Translation
Charge (pH 7) 5.88
Kyte-Doolittle Hydrophobicity Value -0.506
Molecular Weight (kDa) 43273.8
Isoelectric Point (pI) 8.21

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 16 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG030296 (2 members)
Putative Inparalogs 2 predicted inparalogs
zonular occludens toxin (MDS_2609) 98.7% identity
zonular occludens toxin (MDS_2609) 98.7% identity

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_3185

Human Homologs

References

No references are associated with this feature.