Pseudomonas mendocina NK-01, MDS_3528

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_3528
Name
Replicon chromosome
Genomic location 3888129 - 3890090 (+ strand)

Cross-References

RefSeq YP_004381311.1
GI 330504442
Entrez 10458310
INSDC AEB59559.1
NCBI Locus Tag MDS_3528
UniParc UPI000206D8FF
UniProtKB Acc F4DRL9
UniProtKB ID F4DRL9_PSEMN
UniRef100 UniRef100_F4DRL9
UniRef50 UniRef50_Q9HYF0
UniRef90 UniRef90_F4DRL9

Product

Feature Type CDS
Coding Frame 1
Product Name
5-methylaminomethyl-2-thiouridine methyltransferase
Synonyms
Evidence for Translation
Charge (pH 7) -2.98
Kyte-Doolittle Hydrophobicity Value -0.095
Molecular Weight (kDa) 71274.6
Isoelectric Point (pI) 6.74

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 241 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002184 (530 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_3528

Human Homologs

References

No references are associated with this feature.