Pseudomonas mendocina NK-01, MDS_3745
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas mendocina NK-01
GCF_000204295.1|latest |
| Locus Tag |
MDS_3745
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 4120391 - 4120537 (+ strand) |
Cross-References
| RefSeq | YP_004381528.1 |
| GI | 330504659 |
| Entrez | 10458527 |
| INSDC | AEB59776.1 |
| NCBI Locus Tag | MDS_3745 |
| UniParc | UPI000206DEB9 |
| UniProtKB Acc | F4DU88 |
| UniProtKB ID | F4DU88_PSEMN |
| UniRef100 | UniRef100_F4DU88 |
| UniRef50 | UniRef50_F4DU88 |
| UniRef90 | UniRef90_F4DU88 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
ISPssy, transposase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 6.46 |
| Kyte-Doolittle Hydrophobicity Value | -0.044 |
| Molecular Weight (kDa) | 5465.5 |
| Isoelectric Point (pI) | 12.53 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 22 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG013904 (436 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: MDS_3745
Search term: ISPssy, transposase
|
Human Homologs
References
No references are associated with this feature.