Pseudomonas mendocina NK-01, MDS_3753

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_3753
Name
Replicon chromosome
Genomic location 4128595 - 4129566 (+ strand)

Cross-References

RefSeq YP_004381536.1
GI 330504667
Entrez 10458535
INSDC AEB59784.1
NCBI Locus Tag MDS_3753
UniParc UPI000206DEC1
UniProtKB Acc F4DU96
UniProtKB ID F4DU96_PSEMN
UniRef100 UniRef100_F4DU96
UniRef50 UniRef50_S3MIT4
UniRef90 UniRef90_F4DU96

Product

Feature Type CDS
Coding Frame 1
Product Name
LysR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -10.68
Kyte-Doolittle Hydrophobicity Value -0.052
Molecular Weight (kDa) 34932.2
Isoelectric Point (pI) 5.07

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 467 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002693 (937 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_3753

Human Homologs

References

No references are associated with this feature.