Pseudomonas mendocina NK-01, MDS_3754
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas mendocina NK-01
GCF_000204295.1|latest |
| Locus Tag |
MDS_3754
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 4129563 - 4130942 (+ strand) |
Cross-References
| RefSeq | YP_004381537.1 |
| GI | 330504668 |
| Entrez | 10458536 |
| INSDC | AEB59785.1 |
| NCBI Locus Tag | MDS_3754 |
| UniParc | UPI000206DEC2 |
| UniProtKB Acc | F4DU97 |
| UniProtKB ID | F4DU97_PSEMN |
| UniRef100 | UniRef100_F4DU97 |
| UniRef50 | UniRef50_Q886X9 |
| UniRef90 | UniRef90_A4XY22 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
exodeoxyribonuclease VII large subunit
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 17.85 |
| Kyte-Doolittle Hydrophobicity Value | -0.207 |
| Molecular Weight (kDa) | 50579.5 |
| Isoelectric Point (pI) | 11.14 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 531 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG001887 (552 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: MDS_3754
Search term: exodeoxyribonuclease VII large subunit
|
Human Homologs
References
No references are associated with this feature.