Pseudomonas mendocina NK-01, MDS_3765

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_3765
Name
Replicon chromosome
Genomic location 4142894 - 4144006 (- strand)

Cross-References

RefSeq YP_004381548.1
GI 330504679
Entrez 10458547
INSDC AEB59796.1
NCBI Locus Tag MDS_3765
UniParc UPI000206DECD
UniProtKB Acc F4DUA8
UniProtKB ID F4DUA8_PSEMN
UniRef100 UniRef100_F4DUA8
UniRef50 UniRef50_P72241
UniRef90 UniRef90_Q4K6U9

Product

Feature Type CDS
Coding Frame 1
Product Name
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
Synonyms
Evidence for Translation
Charge (pH 7) -4.69
Kyte-Doolittle Hydrophobicity Value -0.003
Molecular Weight (kDa) 39865.5
Isoelectric Point (pI) 5.76

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 515 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001863 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_3765

Human Homologs

References

No references are associated with this feature.