Pseudomonas mendocina NK-01, MDS_3766

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_3766
Name
Replicon chromosome
Genomic location 4144010 - 4145005 (- strand)

Cross-References

RefSeq YP_004381549.1
GI 330504680
Entrez 10458548
INSDC AEB59797.1
NCBI Locus Tag MDS_3766
UniParc UPI000206DECE
UniProtKB Acc F4DUA9
UniProtKB ID F4DUA9_PSEMN
UniRef100 UniRef100_F4DUA9
UniRef50 UniRef50_A4XY33
UniRef90 UniRef90_F4DUA9

Product

Feature Type CDS
Coding Frame 1
Product Name
helix-turn-helix domain-containing protein
Synonyms
Evidence for Translation
Charge (pH 7) -19.57
Kyte-Doolittle Hydrophobicity Value -0.161
Molecular Weight (kDa) 34617.3
Isoelectric Point (pI) 4.30

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 215 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001862 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_3766

Human Homologs

References

No references are associated with this feature.