Pseudomonas mendocina NK-01, MDS_3774

Gene Feature Overview

Strain	Pseudomonas mendocina NK-01 GCF_000204295.1|latest
Locus Tag	MDS_3774
Name
Replicon	chromosome
Genomic location	4150488 - 4150811 (- strand)

Cross-References

RefSeq	YP_004381557.1
GI	330504688
Entrez	10458556
INSDC	AEB59805.1
NCBI Locus Tag	MDS_3774
UniParc	UPI0000E7D5B3
UniProtKB Acc	F4DUB7
UniProtKB ID	F4DUB7_PSEMN
UniRef100	UniRef100_F4DUB7
UniRef50	UniRef50_Q8GLE6
UniRef90	UniRef90_C1DE66

Product

Feature Type	CDS
Coding Frame	1
Product Name	iron-sulfur cluster assembly protein IscA
Synonyms
Evidence for Translation
Charge (pH 7)	-5.62
Kyte-Doolittle Hydrophobicity Value	-0.157
Molecular Weight (kDa)	11.6
Isoelectric Point (pI)	4.57

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 443 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001854 (535 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: MDS_3774 Search term: iron-sulfur cluster assembly protein IscA

Human Homologs

Ensembl 110, assembly GRCh38.p14

ENSP00000365159 iron-sulfur cluster assembly 1 [Source:HGNC Symbol;Acc:HGNC:28660] E-value: 1.3e-21 Percent Identity: 41.5

References