Pseudomonas mendocina NK-01, MDS_3775

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_3775
Name
Replicon chromosome
Genomic location 4150825 - 4151211 (- strand)

Cross-References

RefSeq YP_004381558.1
GI 330504689
Entrez 10458557
INSDC AEB59806.1
NCBI Locus Tag MDS_3775
UniParc UPI0000E7D423
UniProtKB Acc F4DUB8
UniProtKB ID F4DUB8_PSEMN
UniRef100 UniRef100_F4DUB8
UniRef50 UniRef50_O31270
UniRef90 UniRef90_O31270

Product

Feature Type CDS
Coding Frame 1
Product Name
scaffold protein
Synonyms
Evidence for Translation
Charge (pH 7) -2.62
Kyte-Doolittle Hydrophobicity Value -0.287
Molecular Weight (kDa) 13.8
Isoelectric Point (pI) 5.23

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 417 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001853 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_3775
Search term: scaffold protein

Human Homologs

Ensembl 110, assembly GRCh38.p14
iron-sulfur cluster assembly enzyme [Source:HGNC Symbol;Acc:HGNC:29882]
E-value: 9.5e-48
Percent Identity: 72.4

References

No references are associated with this feature.