Pseudomonas mendocina NK-01, MDS_4130

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_4130
Name
Replicon chromosome
Genomic location 4534229 - 4535584 (- strand)

Cross-References

RefSeq YP_004381913.1
GI 330505044
Entrez 10458912
INSDC AEB60161.1
NCBI Locus Tag MDS_4130
UniParc UPI000206DAEC
UniProtKB Acc F4DYI3
UniProtKB ID F4DYI3_PSEMN
UniRef100 UniRef100_F4DYI3
UniRef50 UniRef50_P37773
UniRef90 UniRef90_F6A839

Product

Feature Type CDS
Coding Frame 1
Product Name
UDP-N-acetylmuramate--L-alanine ligase
Synonyms
Evidence for Translation
Charge (pH 7) -6.75
Kyte-Doolittle Hydrophobicity Value 0.044
Molecular Weight (kDa) 48314.7
Isoelectric Point (pI) 6.32

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 576 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001663 (497 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_4130

Human Homologs

References

No references are associated with this feature.