Pseudomonas mendocina NK-01, MDS_4143

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_4143
Name
Replicon chromosome
Genomic location 4548649 - 4549500 (+ strand)

Cross-References

RefSeq YP_004381926.1
GI 330505057
Entrez 10458925
NCBI Locus Tag MDS_4143

Product

Feature Type CDS
Coding Frame 1
Product Name
shikimate 5-dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) -6.16
Kyte-Doolittle Hydrophobicity Value 0.135
Molecular Weight (kDa) 29.9
Isoelectric Point (pI) 5.59

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 602 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000242 (500 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_4143

Human Homologs

References

No references are associated with this feature.