Pseudomonas mendocina NK-01, MDS_4156

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_4156
Name
Replicon chromosome
Genomic location 4565524 - 4565919 (- strand)

Cross-References

RefSeq YP_004381939.1
GI 330505070
Entrez 10458938
INSDC AEB60187.1
NCBI Locus Tag MDS_4156
UniParc UPI000206DB05
UniProtKB Acc F4DYK9
UniProtKB ID F4DYK9_PSEMN
UniRef100 UniRef100_F4DYK9
UniRef50 UniRef50_P20370
UniRef90 UniRef90_D7HYY0

Product

Feature Type CDS
Coding Frame 1
Product Name
4-carboxymuconolactone decarboxylase
Synonyms
Evidence for Translation
Charge (pH 7) -2.83
Kyte-Doolittle Hydrophobicity Value -0.396
Molecular Weight (kDa) 14.9
Isoelectric Point (pI) 6.00

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 250 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000231 (995 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_4156

Human Homologs

References

No references are associated with this feature.