Pseudomonas mendocina NK-01, MDS_4177

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_4177
Name
Replicon chromosome
Genomic location 4586308 - 4587240 (- strand)

Cross-References

RefSeq YP_004381960.1
GI 330505091
Entrez 10458959
INSDC AEB60208.1
NCBI Locus Tag MDS_4177
UniParc UPI000206DBF5
UniProtKB Acc F4DYN0
UniProtKB ID F4DYN0_PSEMN
UniRef100 UniRef100_F4DYN0
UniRef50 UniRef50_Q48JW3
UniRef90 UniRef90_Q9F5V8

Product

Feature Type CDS
Coding Frame 1
Product Name
pca operon transcriptional activator PcaQ
Synonyms
Evidence for Translation
Charge (pH 7) -3.28
Kyte-Doolittle Hydrophobicity Value 0.071
Molecular Weight (kDa) 33809.6
Isoelectric Point (pI) 6.31

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 535 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000150 (449 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_4177

Human Homologs

References

No references are associated with this feature.