Pseudomonas mendocina NK-01, MDS_4187

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_4187
Name
Replicon chromosome
Genomic location 4598000 - 4598290 (- strand)

Cross-References

RefSeq YP_004381970.1
GI 330505101
Entrez 10458969
INSDC AEB60218.1
NCBI Locus Tag MDS_4187
UniParc UPI000206DBFF
UniProtKB Acc F4DZC9
UniProtKB ID F4DZC9_PSEMN
UniRef100 UniRef100_F4DZC9
UniRef50 UniRef50_P00948
UniRef90 UniRef90_S6ANN7

Product

Feature Type CDS
Coding Frame 1
Product Name
muconolactone delta-isomerase
Synonyms
Evidence for Translation
Charge (pH 7) -0.60
Kyte-Doolittle Hydrophobicity Value -0.476
Molecular Weight (kDa) 11.2
Isoelectric Point (pI) 6.80

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
1MLI INTRAMOLECULAR OXIDOREDUCTASE 11/02/89 CRYSTAL STRUCTURE OF MUCONOLACTONE ISOMERASE AT 3.3 ANGSTROMS RESOLUTION PSEUDOMONAS PUTIDA 3.3 X-RAY DIFFRACTION 90.6

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 55 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003052 (478 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_4187

Human Homologs

References

No references are associated with this feature.