Pseudomonas mendocina NK-01, MDS_4400

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_4400
Name
Replicon chromosome
Genomic location 4823084 - 4824889 (- strand)

Cross-References

RefSeq YP_004382183.1
GI 330505314
Entrez 10459182
INSDC AEB60431.1
NCBI Locus Tag MDS_4400
UniParc UPI000206E1B5
UniProtKB Acc F4DMD1
UniProtKB ID F4DMD1_PSEMN
UniRef100 UniRef100_F4DMD1
UniRef50 UniRef50_D6CM31
UniRef90 UniRef90_F6AGM6

Product

Feature Type CDS
Coding Frame 1
Product Name
acyl-CoA dehydrogenase domain-containing protein
Synonyms
Evidence for Translation
Charge (pH 7) -13.74
Kyte-Doolittle Hydrophobicity Value -0.196
Molecular Weight (kDa) 65616.5
Isoelectric Point (pI) 5.69

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 431 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000493 (2559 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_4400

Human Homologs

References

No references are associated with this feature.