Pseudomonas mendocina NK-01, MDS_4521

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_4521
Name
Replicon chromosome
Genomic location 4954883 - 4956001 (+ strand)

Cross-References

RefSeq YP_004382304.1
GI 330505435
Entrez 10459303
INSDC AEB60552.1
NCBI Locus Tag MDS_4521
UniParc UPI000206E50F
UniProtKB Acc F4DP25
UniProtKB ID F4DP25_PSEMN
UniRef100 UniRef100_F4DP25
UniRef50 UniRef50_B9KZG1
UniRef90 UniRef90_W6R822

Product

Feature Type CDS
Coding Frame 1
Product Name
spermidine/putrescine ABC transporter ATPase
Synonyms
Evidence for Translation
Charge (pH 7) -5.43
Kyte-Doolittle Hydrophobicity Value -0.193
Molecular Weight (kDa) 41492.0
Isoelectric Point (pI) 5.70

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG025262 (9 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_4521

Human Homologs

Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 11 [Source:HGNC Symbol;Acc:HGNC:42]
E-value: 2.0e-21
Percent Identity: 30.7

References

No references are associated with this feature.