Pseudomonas mendocina NK-01, MDS_4523

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_4523
Name
Replicon chromosome
Genomic location 4957215 - 4958450 (+ strand)

Cross-References

RefSeq YP_004382306.1
GI 330505437
Entrez 10459305
INSDC AEB60554.1
NCBI Locus Tag MDS_4523
UniParc UPI000206E511
UniProtKB Acc F4DP27
UniProtKB ID F4DP27_PSEMN
UniRef100 UniRef100_F4DP27
UniRef50 UniRef50_W6R2V6
UniRef90 UniRef90_W6R2V6

Product

Feature Type CDS
Coding Frame 1
Product Name
binding-protein-dependent transport system inner membrane protein
Synonyms
Evidence for Translation
Charge (pH 7) 1.88
Kyte-Doolittle Hydrophobicity Value 0.392
Molecular Weight (kDa) 45982.4
Isoelectric Point (pI) 7.78

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 406 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG025264 (9 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_4523

Human Homologs

References

No references are associated with this feature.