Pseudomonas mendocina NK-01, MDS_4681

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_4681
Name
Replicon chromosome
Genomic location 5126691 - 5127485 (+ strand)

Cross-References

RefSeq YP_004382464.1
GI 330505595
Entrez 10459463
INSDC AEB60712.1
NCBI Locus Tag MDS_4681
UniParc UPI000206DB1B
UniProtKB Acc F4DQV6
UniProtKB ID F4DQV6_PSEMN
UniRef100 UniRef100_F4DQV6
UniRef50 UniRef50_W8H070
UniRef90 UniRef90_F4DQV6

Product

Feature Type CDS
Coding Frame 1
Product Name
XRE family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -5.35
Kyte-Doolittle Hydrophobicity Value -0.020
Molecular Weight (kDa) 29177.2
Isoelectric Point (pI) 5.59

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 80 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG025291 (16 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_4681

Human Homologs

References

No references are associated with this feature.