Pseudomonas mendocina NK-01, MDS_4774

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_4774
Name
Replicon chromosome
Genomic location 5227460 - 5228218 (+ strand)

Cross-References

RefSeq YP_004382557.1
GI 330505688
Entrez 10459556
INSDC AEB60805.1
NCBI Locus Tag MDS_4774
UniParc UPI000206DD30
UniProtKB Acc F4DRT5
UniProtKB ID F4DRT5_PSEMN
UniRef100 UniRef100_F4DRT5
UniRef50 UniRef50_W0TJB1
UniRef90 UniRef90_F4DRT5

Product

Feature Type CDS
Coding Frame 1
Product Name
teichoic acids export ATP-binding protein TagH-like protein
Synonyms
Evidence for Translation
Charge (pH 7) 7.14
Kyte-Doolittle Hydrophobicity Value -0.025
Molecular Weight (kDa) 27.7
Isoelectric Point (pI) 9.89

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001312 (616 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_4774

Human Homologs

Ensembl 97, assembly GRCh38.p12
ATP binding cassette subfamily A member 7 [Source:HGNC Symbol;Acc:HGNC:37]
E-value: 6.4e-20
Percent Identity: 29.8
Ensembl 97, assembly GRCh38.p12
ATP binding cassette subfamily A member 7 [Source:HGNC Symbol;Acc:HGNC:37]
E-value: 6.4e-20
Percent Identity: 29.8
Ensembl 97, assembly GRCh38.p12
ATP binding cassette subfamily A member 7 [Source:HGNC Symbol;Acc:HGNC:37]
E-value: 6.4e-20
Percent Identity: 29.8
Ensembl 97, assembly GRCh38.p12
ATP binding cassette subfamily A member 7 [Source:HGNC Symbol;Acc:HGNC:37]
E-value: 6.4e-20
Percent Identity: 29.8

References

No references are associated with this feature.