Pseudomonas mendocina NK-01, MDS_4805

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_4805
Name
Replicon chromosome
Genomic location 5262592 - 5263239 (- strand)

Cross-References

RefSeq YP_004382588.1
GI 330505719
Entrez 10459587
INSDC AEB60836.1
NCBI Locus Tag MDS_4805
UniParc UPI000206DE1F
UniProtKB Acc F4DSK6
UniProtKB ID F4DSK6_PSEMN
UniRef100 UniRef100_F4DSK6
UniRef50 UniRef50_Q9I767
UniRef90 UniRef90_A4Y0T8

Product

Feature Type CDS
Coding Frame 1
Product Name
HAD family hydrolase
Synonyms
Evidence for Translation
Charge (pH 7) -7.86
Kyte-Doolittle Hydrophobicity Value -0.207
Molecular Weight (kDa) 24190.1
Isoelectric Point (pI) 5.33

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 421 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000064 (497 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_4805

Human Homologs

References

No references are associated with this feature.