Pseudomonas mendocina NK-01, MDS_4809

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_4809
Name
Replicon chromosome
Genomic location 5266312 - 5268258 (+ strand)

Cross-References

RefSeq YP_004382592.1
GI 330505723
Entrez 10459591
NCBI Locus Tag MDS_4809

Product

Feature Type CDS
Coding Frame 1
Product Name
ABC transporter ATP-binding protein/permease
Synonyms
Evidence for Translation
Charge (pH 7) -4.42
Kyte-Doolittle Hydrophobicity Value 0.219
Molecular Weight (kDa) 69045.1
Isoelectric Point (pI) 6.47

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003137 (494 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_4809

Human Homologs

Ensembl 97, assembly GRCh38.p12
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value: 3.8e-24
Percent Identity: 37.6
Ensembl 97, assembly GRCh38.p12
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value: 3.8e-24
Percent Identity: 37.6
Ensembl 97, assembly GRCh38.p12
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value: 3.8e-24
Percent Identity: 37.6
Ensembl 97, assembly GRCh38.p12
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value: 3.8e-24
Percent Identity: 37.6
Ensembl 97, assembly GRCh38.p12
ATP binding cassette subfamily B member 4 [Source:HGNC Symbol;Acc:HGNC:45]
E-value: 3.8e-24
Percent Identity: 37.6

References

No references are associated with this feature.