Pseudomonas mendocina NK-01, MDS_4817

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_4817
Name
Replicon chromosome
Genomic location 5275205 - 5275996 (- strand)

Cross-References

RefSeq YP_004382600.1
GI 330505731
Entrez 10459599
INSDC AEB60848.1
NCBI Locus Tag MDS_4817
UniParc UPI000206DEEE
UniProtKB Acc F4DSL8
UniProtKB ID F4DSL8_PSEMN
UniRef100 UniRef100_F4DSL8
UniRef50 UniRef50_Q4KA07
UniRef90 UniRef90_W6R1A8

Product

Feature Type CDS
Coding Frame 1
Product Name
AraC family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 1.11
Kyte-Doolittle Hydrophobicity Value -0.210
Molecular Weight (kDa) 29463.3
Isoelectric Point (pI) 7.56

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 238 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000161 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_4817

Human Homologs

References

No references are associated with this feature.