Pseudomonas mendocina NK-01, MDS_4820

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_4820
Name
Replicon chromosome
Genomic location 5277706 - 5278767 (+ strand)

Cross-References

RefSeq YP_004382603.1
GI 330505734
Entrez 10459602
INSDC AEB60851.1
NCBI Locus Tag MDS_4820
UniParc UPI000206DEF1
UniProtKB Acc F4DSM1
UniProtKB ID F4DSM1_PSEMN
UniRef100 UniRef100_F4DSM1
UniRef50 UniRef50_Q4KKM4
UniRef90 UniRef90_W6R2B1

Product

Feature Type CDS
Coding Frame 1
Product Name
radical SAM domain-containing protein
Synonyms
Evidence for Translation
Charge (pH 7) 4.75
Kyte-Doolittle Hydrophobicity Value -0.455
Molecular Weight (kDa) 39999.3
Isoelectric Point (pI) 8.36

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 298 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000068 (517 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_4820

Human Homologs

References

No references are associated with this feature.