Pseudomonas mendocina NK-01, MDS_4822

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_4822
Name
Replicon chromosome
Genomic location 5279906 - 5281717 (- strand)

Cross-References

RefSeq YP_004382605.1
GI 330505736
Entrez 10459604
NCBI Locus Tag MDS_4822

Product

Feature Type CDS
Coding Frame 1
Product Name
pyruvate carboxylase subunit B
Synonyms
Evidence for Translation
Charge (pH 7) -11.92
Kyte-Doolittle Hydrophobicity Value -0.144
Molecular Weight (kDa) 65636.7
Isoelectric Point (pI) 5.44

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 540 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004985 (553 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_4822

Human Homologs

Ensembl 97, assembly GRCh38.p12
pyruvate carboxylase [Source:HGNC Symbol;Acc:HGNC:8636]
E-value: 1.5e-80
Percent Identity: 33.3
Ensembl 97, assembly GRCh38.p12
pyruvate carboxylase [Source:HGNC Symbol;Acc:HGNC:8636]
E-value: 1.5e-80
Percent Identity: 33.3
Ensembl 97, assembly GRCh38.p12
pyruvate carboxylase [Source:HGNC Symbol;Acc:HGNC:8636]
E-value: 1.5e-80
Percent Identity: 33.3
Ensembl 97, assembly GRCh38.p12
pyruvate carboxylase [Source:HGNC Symbol;Acc:HGNC:8636]
E-value: 1.5e-80
Percent Identity: 33.3
Ensembl 97, assembly GRCh38.p12
pyruvate carboxylase [Source:HGNC Symbol;Acc:HGNC:8636]
E-value: 1.5e-80
Percent Identity: 33.3
Ensembl 97, assembly GRCh38.p12
pyruvate carboxylase [Source:HGNC Symbol;Acc:HGNC:8636]
E-value: 1.5e-80
Percent Identity: 33.3
Ensembl 97, assembly GRCh38.p12
pyruvate carboxylase [Source:HGNC Symbol;Acc:HGNC:8636]
E-value: 1.5e-80
Percent Identity: 33.3

References

No references are associated with this feature.