Pseudomonas mendocina NK-01, MDS_4823

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_4823
Name
Replicon chromosome
Genomic location 5281726 - 5283141 (- strand)

Cross-References

RefSeq YP_004382606.1
GI 330505737
Entrez 10459605
INSDC AEB60854.1
NCBI Locus Tag MDS_4823
UniParc UPI000206DEF4
UniProtKB Acc F4DSM4
UniProtKB ID F4DSM4_PSEMN
UniRef100 UniRef100_F4DSM4
UniRef50 UniRef50_P49787
UniRef90 UniRef90_A0A069Q656

Product

Feature Type CDS
Coding Frame 1
Product Name
pyruvate carboxylase subunit A
Synonyms
Evidence for Translation
Charge (pH 7) -3.58
Kyte-Doolittle Hydrophobicity Value -0.224
Molecular Weight (kDa) 52099.9
Isoelectric Point (pI) 6.45

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 630 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004986 (552 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_4823

Human Homologs

Ensembl 97, assembly GRCh38.p12
pyruvate carboxylase [Source:HGNC Symbol;Acc:HGNC:8636]
E-value: 3.7e-122
Percent Identity: 48.8
Ensembl 97, assembly GRCh38.p12
pyruvate carboxylase [Source:HGNC Symbol;Acc:HGNC:8636]
E-value: 3.7e-122
Percent Identity: 48.8
Ensembl 97, assembly GRCh38.p12
pyruvate carboxylase [Source:HGNC Symbol;Acc:HGNC:8636]
E-value: 3.7e-122
Percent Identity: 48.8
Ensembl 97, assembly GRCh38.p12
pyruvate carboxylase [Source:HGNC Symbol;Acc:HGNC:8636]
E-value: 3.7e-122
Percent Identity: 48.8
Ensembl 97, assembly GRCh38.p12
pyruvate carboxylase [Source:HGNC Symbol;Acc:HGNC:8636]
E-value: 3.7e-122
Percent Identity: 48.8
Ensembl 97, assembly GRCh38.p12
pyruvate carboxylase [Source:HGNC Symbol;Acc:HGNC:8636]
E-value: 3.7e-122
Percent Identity: 48.8
Ensembl 97, assembly GRCh38.p12
pyruvate carboxylase [Source:HGNC Symbol;Acc:HGNC:8636]
E-value: 3.7e-122
Percent Identity: 48.8
Ensembl 97, assembly GRCh38.p12
pyruvate carboxylase [Source:HGNC Symbol;Acc:HGNC:8636]
E-value: 3.7e-122
Percent Identity: 48.8

References

No references are associated with this feature.