Pseudomonas mendocina NK-01, MDS_4832

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_4832
Name
Replicon chromosome
Genomic location 5293123 - 5294061 (- strand)

Cross-References

RefSeq YP_004382615.1
GI 330505746
Entrez 10459614
INSDC AEB60863.1
NCBI Locus Tag MDS_4832
UniParc UPI000206DEFD
UniProtKB Acc F4DSN3
UniProtKB ID F4DSN3_PSEMN
UniRef100 UniRef100_F4DSN3
UniRef50 UniRef50_S6AEA1
UniRef90 UniRef90_W6R3V4

Product

Feature Type CDS
Coding Frame 1
Product Name
periplasmic solute binding protein
Synonyms
Evidence for Translation
Charge (pH 7) -10.00
Kyte-Doolittle Hydrophobicity Value -0.122
Molecular Weight (kDa) 34052.2
Isoelectric Point (pI) 5.91

Subcellular localization

Individual Mappings
Localization Confidence PMID
Periplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 424 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG005037 (538 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_4832

Human Homologs

References

No references are associated with this feature.