Pseudomonas mendocina NK-01, MDS_4842

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas mendocina NK-01
GCF_000204295.1|latest
Locus Tag
MDS_4842
Name
Replicon chromosome
Genomic location 5301328 - 5301753 (+ strand)

Cross-References

RefSeq YP_004382625.1
GI 330505756
Entrez 10459624
INSDC AEB60873.1
NCBI Locus Tag MDS_4842
UniParc UPI000206DF07
UniProtKB Acc F4DSP3
UniProtKB ID F4DSP3_PSEMN
UniRef100 UniRef100_F4DSP3
UniRef50 UniRef50_A9I0Z9
UniRef90 UniRef90_F4DSP3

Product

Feature Type CDS
Coding Frame 1
Product Name
ring-cleaving dioxygenase
Synonyms
Evidence for Translation
Charge (pH 7) -7.11
Kyte-Doolittle Hydrophobicity Value -0.062
Molecular Weight (kDa) 15928.0
Isoelectric Point (pI) 5.17

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 118 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000790 (449 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: MDS_4842

Human Homologs

References

No references are associated with this feature.