Pseudomonas syringae pv. tomato DC3000, PSPTO_0144 (prlC)

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_0144
NCBI Old Locus Tag	PSPTO0144
Name	prlC Synonym: PSPTO0144
Replicon	chromosome
Genomic location	166673 - 168724 (- strand)

Cross-References

RefSeq	NP_790003.1
GI	28867384
Entrez	1181752
INSDC	AAO53698.1
NCBI Locus Tag	PSPTO_0144
NCBI Old Locus Tag	PSPTO0144
UniParc	UPI000000831D
UniProtKB Acc	Q88B75
UniProtKB ID	Q88B75_PSESM
UniRef100	UniRef100_Q88B75
UniRef50	UniRef50_G8PY41
UniRef90	UniRef90_G8PY41

Product

Feature Type	CDS
Coding Frame	1
Product Name	oligopeptidase A
Synonyms
Evidence for Translation
Charge (pH 7)	-25.53
Kyte-Doolittle Hydrophobicity Value	-0.264
Molecular Weight (kDa)	75.6
Isoelectric Point (pI)	4.75

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 335 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000066 (533 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_0144 Search term: prlC Search term: oligopeptidase A

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000370372 neurolysin [Source:HGNC Symbol;Acc:HGNC:16058] E-value: 3.4e-83 Percent Identity: 32.8
Ensembl 110, assembly GRCh38.p14	ENSP00000423214 neurolysin [Source:HGNC Symbol;Acc:HGNC:16058] E-value: 3.4e-83 Percent Identity: 32.8

References