Pseudomonas syringae pv. tomato DC3000, PSPTO_0145

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003)
GCF_000007805.1|latest
Locus Tag
PSPTO_0145
NCBI Old Locus TagPSPTO0145
Name
Synonym: PSPTO0145
Replicon chromosome
Genomic location 168837 - 169382 (+ strand)

Cross-References

RefSeq NP_790004.1
GI 28867385
Entrez 1181753
INSDC AAO53699.1
NCBI Locus Tag PSPTO_0145
NCBI Old Locus Tag PSPTO0145
UniParc UPI000000831E
UniProtKB Acc Q88B74
UniProtKB ID Q88B74_PSESM
UniRef100 UniRef100_Q88B74
UniRef50 UniRef50_A0A085HYV7
UniRef90 UniRef90_Q88B74

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -2.12
Kyte-Doolittle Hydrophobicity Value 0.063
Molecular Weight (kDa) 19.5
Isoelectric Point (pI) 6.51

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 500 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000065 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_0145

Human Homologs

References

No references are associated with this feature.