Pseudomonas syringae pv. tomato DC3000, PSPTO_0157 (trpI)

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_0157
NCBI Old Locus Tag	PSPTO0157
Name	trpI Synonym: PSPTO0157
Replicon	chromosome
Genomic location	177812 - 178720 (- strand)

Cross-References

RefSeq	NP_790016.1
GI	28867397
Entrez	1181765
INSDC	AAO53711.1
NCBI Locus Tag	PSPTO_0157
NCBI Old Locus Tag	PSPTO0157
UniParc	UPI000000832A
UniProtKB Acc	Q88B62
UniProtKB ID	Q88B62_PSESM
UniRef100	UniRef100_Q88B62
UniRef50	UniRef50_P11720
UniRef90	UniRef90_Q48QG5

Product

Feature Type	CDS
Coding Frame	1
Product Name	trpBA operon transcriptional activator
Synonyms
Evidence for Translation
Charge (pH 7)	-1.09
Kyte-Doolittle Hydrophobicity Value	-0.179
Molecular Weight (kDa)	33.0
Isoelectric Point (pI)	6.53

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 409 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000037 (536 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_0157 Search term: trpI Search term: trpBA operon transcriptional activator

Human Homologs

References