Pseudomonas syringae pv. tomato DC3000, PSPTO_0170 (hemF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000
GCF_000007805.1|latest
Locus Tag
PSPTO_0170
NCBI Old Locus TagPSPTO0170
Name
hemF
Synonym: PSPTO0170
Replicon chromosome
Genomic location 190442 - 191356 (- strand)

Cross-References

RefSeq NP_790029.1
GI 28867410
Entrez 1181778
INSDC AAO53724.1
NCBI Locus Tag PSPTO_0170
NCBI Old Locus Tag PSPTO0170
UniParc UPI0000008337
UniProtKB Acc Q88B49
UniProtKB ID HEM6_PSESM
UniRef100 UniRef100_Q88B49
UniRef50 UniRef50_P84155
UniRef90 UniRef90_Q88B49

Product

Feature Type CDS
Coding Frame 1
Product Name
coproporphyrinogen III oxidase
Synonyms
Evidence for Translation
Charge (pH 7) -7.47
Kyte-Doolittle Hydrophobicity Value -0.442
Molecular Weight (kDa) 34.5
Isoelectric Point (pI) 5.77

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 278 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000024 (554 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_0170
Search term: hemF

Human Homologs

Ensembl 97, assembly GRCh38.p12
coproporphyrinogen oxidase [Source:HGNC Symbol;Acc:HGNC:2321]
E-value: 4.6e-73
Percent Identity: 44.7

References

No references are associated with this feature.