Pseudomonas syringae pv. tomato DC3000, PSPTO_0210

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_0210
NCBI Old Locus Tag	PSPTO0210
Name	Synonym: PSPTO0210
Replicon	chromosome
Genomic location	235527 - 236402 (- strand)

Cross-References

RefSeq	NP_790061.1
GI	28867442
Entrez	1181818
INSDC	AAO53756.1
NCBI Locus Tag	PSPTO_0210
NCBI Old Locus Tag	PSPTO0210
UniParc	UPI0000008352
UniProtKB Acc	Q88B23
UniProtKB ID	Q88B23_PSESM
UniRef100	UniRef100_Q88B23
UniRef50	UniRef50_Q88B23
UniRef90	UniRef90_Q88B23

Product

Feature Type	CDS
Coding Frame	1
Product Name	membrane protein
Synonyms
Evidence for Translation
Charge (pH 7)	4.10
Kyte-Doolittle Hydrophobicity Value	1.193
Molecular Weight (kDa)	31.3
Isoelectric Point (pI)	8.95

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 242 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG017186 (2 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_0210 Search term: membrane protein

Human Homologs

References