Pseudomonas syringae pv. tomato DC3000, PSPTO_0345

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_0345
NCBI Old Locus Tag	PSPTO0345
Name	Synonym: PSPTO0345
Replicon	chromosome
Genomic location	376083 - 376370 (+ strand)

Cross-References

RefSeq	NP_790195.1
GI	28867576
Entrez	1181954
INSDC	AAO53890.1
NCBI Locus Tag	PSPTO_0345
NCBI Old Locus Tag	PSPTO0345
UniParc	UPI00000083D6
UniProtKB Acc	Q88AP2
UniProtKB ID	Q88AP2_PSESM
UniRef100	UniRef100_A0A038GL95
UniRef50	UniRef50_A4XNL1
UniRef90	UniRef90_Q4ZZS8

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	1.19
Kyte-Doolittle Hydrophobicity Value	-0.199
Molecular Weight (kDa)	10.7
Isoelectric Point (pI)	8.48

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 42 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG005033 (538 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_0345

Human Homologs

References