Pseudomonas syringae pv. tomato DC3000, PSPTO_0406

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000
GCF_000007805.1|latest
Locus Tag
PSPTO_0406
NCBI Old Locus TagPSPTO0406
Name
Synonym: PSPTO0406
Replicon chromosome
Genomic location 449550 - 452243 (- strand)

Cross-References

RefSeq NP_790255.1
GI 28867636
Entrez 1182015
INSDC AAO53950.1
NCBI Locus Tag PSPTO_0406
NCBI Old Locus Tag PSPTO0406
UniParc UPI0000008412
UniProtKB Acc Q88AI4
UniProtKB ID Q88AI4_PSESM
UniRef100 UniRef100_Q88AI4
UniRef50 UniRef50_Q4KJD2
UniRef90 UniRef90_D7HUZ1

Product

Feature Type CDS
Coding Frame 1
Product Name
sensory box/GGDEF domain/EAL domain-containing protein
Synonyms
Evidence for Translation
Charge (pH 7) -17.12
Kyte-Doolittle Hydrophobicity Value -0.314
Molecular Weight (kDa) 100.5
Isoelectric Point (pI) 5.35

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 490 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004624 (539 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_0406

Human Homologs

References

No references are associated with this feature.