Pseudomonas syringae pv. tomato DC3000, PSPTO_0479

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000
GCF_000007805.1|latest
Locus Tag
PSPTO_0479
NCBI Old Locus TagPSPTO0479
Name
Synonym: PSPTO0479
Replicon chromosome
Genomic location 524756 - 525322 (- strand)

Cross-References

RefSeq NP_790328.1
GI 28867709
Entrez 1182088
INSDC AAO54023.1
NCBI Locus Tag PSPTO_0479
NCBI Old Locus Tag PSPTO0479
UniParc UPI0000008459
UniProtKB Acc Q88AB3
UniProtKB ID Q88AB3_PSESM
UniRef100 UniRef100_Q88AB3
UniRef50 UniRef50_Q87YM1
UniRef90 UniRef90_Q88AB3

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -3.31
Kyte-Doolittle Hydrophobicity Value -0.319
Molecular Weight (kDa) 20.7
Isoelectric Point (pI) 6.50

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 40 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG017275 (3 members)
Putative Inparalogs 1 predicted inparalogs
hypothetical protein (PSPTO_3774) 51.0% identity

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_0479

Human Homologs

References

No references are associated with this feature.