Pseudomonas syringae pv. tomato DC3000, PSPTO_0482

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_0482
NCBI Old Locus Tag	PSPTO0482
Name	Synonym: PSPTO0482
Replicon	chromosome
Genomic location	528719 - 529069 (- strand)

Cross-References

RefSeq	NP_790331.1
GI	28867712
Entrez	1182091
INSDC	AAO54026.1
NCBI Locus Tag	PSPTO_0482
NCBI Old Locus Tag	PSPTO0482
UniParc	UPI000000845C
UniProtKB Acc	Q88AB0
UniProtKB ID	Q88AB0_PSESM
UniRef100	UniRef100_Q88AB0
UniRef50	UniRef50_Q88AB0
UniRef90	UniRef90_Q88AB0

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	1.47
Kyte-Doolittle Hydrophobicity Value	-0.542
Molecular Weight (kDa)	12.8
Isoelectric Point (pI)	9.21

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 34 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG017276 (26 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_0482

Human Homologs

References