Pseudomonas syringae pv. tomato DC3000, PSPTO_0486

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000
GCF_000007805.1|latest
Locus Tag
PSPTO_0486
NCBI Old Locus TagPSPTO0486
Name
Synonym: PSPTO0486
Replicon chromosome
Genomic location 532567 - 533568 (+ strand)

Cross-References

RefSeq NP_790335.1
GI 28867716
Entrez 1182095
INSDC AAO54030.1
NCBI Locus Tag PSPTO_0486
NCBI Old Locus Tag PSPTO0486
UniParc UPI0000008460
UniProtKB Acc Q88AA6
UniProtKB ID Q88AA6_PSESM
UniRef100 UniRef100_Q88AA6
UniRef50 UniRef50_G4F269
UniRef90 UniRef90_A0A0D0S6J3

Product

Feature Type CDS
Coding Frame 1
Product Name
ABC transporter substrate-binding protein
Synonyms
Evidence for Translation
Charge (pH 7) -0.14
Kyte-Doolittle Hydrophobicity Value 0.033
Molecular Weight (kDa) 35.9
Isoelectric Point (pI) 6.94

Subcellular localization

Individual Mappings
Localization Confidence PMID
Periplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 240 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG017278 (59 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_0486

Human Homologs

References

No references are associated with this feature.