Pseudomonas syringae pv. tomato DC3000, PSPTO_0489

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000
GCF_000007805.1|latest
Locus Tag
PSPTO_0489
NCBI Old Locus TagPSPTO0489
Name
Synonym: PSPTO0489
Replicon chromosome
Genomic location 535225 - 536268 (+ strand)

Cross-References

RefSeq NP_790338.1
GI 28867719
Entrez 1182098
INSDC AAO54033.1
NCBI Locus Tag PSPTO_0489
NCBI Old Locus Tag PSPTO0489
UniParc UPI0000008463
UniProtKB Acc Q88AA3
UniProtKB ID Q88AA3_PSESM
UniRef100 UniRef100_Q88AA3
UniRef50 UniRef50_U1H6L5
UniRef90 UniRef90_D7I614

Product

Feature Type CDS
Coding Frame 1
Product Name
ABC transporter ATP-binding protein
Synonyms
Evidence for Translation
Charge (pH 7) 0.74
Kyte-Doolittle Hydrophobicity Value -0.015
Molecular Weight (kDa) 37.4
Isoelectric Point (pI) 7.21

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG016906 (169 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_0489

Human Homologs

Ensembl 97, assembly GRCh38.p12
ATP binding cassette subfamily B member 5 [Source:HGNC Symbol;Acc:HGNC:46]
E-value: 7.7e-24
Percent Identity: 36.3
Ensembl 97, assembly GRCh38.p12
ATP binding cassette subfamily B member 5 [Source:HGNC Symbol;Acc:HGNC:46]
E-value: 7.7e-24
Percent Identity: 36.3

References

No references are associated with this feature.