Pseudomonas syringae pv. tomato DC3000, PSPTO_0494 (bioB)

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_0494
NCBI Old Locus Tag	PSPTO0494
Name	bioB Synonym: PSPTO0494
Replicon	chromosome
Genomic location	541032 - 542090 (+ strand)

Cross-References

RefSeq	NP_790343.1
GI	28867724
Entrez	1182103
INSDC	AAO54038.1
NCBI Locus Tag	PSPTO_0494
NCBI Old Locus Tag	PSPTO0494
UniParc	UPI0000008468
UniProtKB Acc	Q88A98
UniProtKB ID	BIOB_PSESM
UniRef100	UniRef100_Q88A98
UniRef50	UniRef50_A6W0Y1
UniRef90	UniRef90_Q88A98

Product

Feature Type	CDS
Coding Frame	1
Product Name	biotin synthetase
Synonyms
Evidence for Translation
Charge (pH 7)	-10.77
Kyte-Doolittle Hydrophobicity Value	-0.159
Molecular Weight (kDa)	38.6
Isoelectric Point (pI)	5.11

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 475 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000487 (537 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_0494 Search term: bioB Search term: biotin synthetase

Human Homologs

References