Pseudomonas syringae pv. tomato DC3000, PSPTO_0495 (bioF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000
GCF_000007805.1|latest
Locus Tag
PSPTO_0495
NCBI Old Locus TagPSPTO0495
Name
bioF
Synonym: PSPTO0495
Replicon chromosome
Genomic location 542154 - 543344 (+ strand)

Cross-References

RefSeq NP_790344.1
GI 28867725
Entrez 1182104
INSDC AAO54039.1
NCBI Locus Tag PSPTO_0495
NCBI Old Locus Tag PSPTO0495
UniParc UPI0000008469
UniProtKB Acc Q88A97
UniProtKB ID BIOF_PSESM
UniRef100 UniRef100_Q88A97
UniRef50 UniRef50_Q3BYN0
UniRef90 UniRef90_Q88A97

Product

Feature Type CDS
Coding Frame 1
Product Name
8-amino-7-oxononanoate synthase
Synonyms
Evidence for Translation
Charge (pH 7) -7.48
Kyte-Doolittle Hydrophobicity Value 0.024
Molecular Weight (kDa) 42.4
Isoelectric Point (pI) 6.11

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 508 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000488 (551 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_0495
Search term: bioF

Human Homologs

Ensembl 97, assembly GRCh38.p12
glycine C-acetyltransferase [Source:HGNC Symbol;Acc:HGNC:4188]
E-value: 3.3e-63
Percent Identity: 38.6

References

No references are associated with this feature.