Pseudomonas syringae pv. tomato DC3000, PSPTO_0496 (bioH)

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_0496
NCBI Old Locus Tag	PSPTO0496
Name	bioH Synonym: PSPTO0496
Replicon	chromosome
Genomic location	543337 - 544068 (+ strand)

Cross-References

RefSeq	NP_790345.1
GI	28867726
Entrez	1182105
INSDC	AAO54040.1
NCBI Locus Tag	PSPTO_0496
NCBI Old Locus Tag	PSPTO0496
UniParc	UPI000000846A
UniProtKB Acc	Q88A96
UniProtKB ID	Q88A96_PSESM
UniRef100	UniRef100_Q88A96
UniRef50	UniRef50_Q4K4T4
UniRef90	UniRef90_Q88A96

Product

Feature Type	CDS
Coding Frame	1
Product Name	bioH protein
Synonyms
Evidence for Translation
Charge (pH 7)	-16.74
Kyte-Doolittle Hydrophobicity Value	0.133
Molecular Weight (kDa)	25.7
Isoelectric Point (pI)	4.23

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 113 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000489 (537 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_0496 Search term: bioH Search term: bioH protein

Human Homologs

References