Pseudomonas syringae pv. tomato DC3000, PSPTO_0500

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_0500
NCBI Old Locus Tag	PSPTO0500
Name	Synonym: PSPTO0500
Replicon	chromosome
Genomic location	546382 - 548187 (+ strand)

Cross-References

RefSeq	NP_790349.1
GI	28867730
Entrez	1182109
INSDC	AAO54044.1
NCBI Locus Tag	PSPTO_0500
NCBI Old Locus Tag	PSPTO0500
UniParc	UPI000000846E
UniProtKB Acc	Q88A92
UniProtKB ID	Q88A92_PSESM
UniRef100	UniRef100_Q88A92
UniRef50	UniRef50_D6CM31
UniRef90	UniRef90_Q4K4T8

Product

Feature Type	CDS
Coding Frame	1
Product Name	acyl-CoA dehydrogenase family protein
Synonyms
Evidence for Translation
Charge (pH 7)	-11.19
Kyte-Doolittle Hydrophobicity Value	-0.149
Molecular Weight (kDa)	65.3
Isoelectric Point (pI)	5.84

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 424 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000493 (2496 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_0500 Search term: acyl-CoA dehydrogenase family protein

Human Homologs

References