Pseudomonas syringae pv. tomato DC3000, PSPTO_0501 (hopU1)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000
GCF_000007805.1|latest
Locus Tag
PSPTO_0501
NCBI Old Locus TagPSPTO0501
Name
hopU1
Synonym: PSPTO0501
Replicon chromosome
Genomic location 548376 - 549170 (- strand)

Cross-References

RefSeq NP_790350.1
GI 28867731
Entrez 1182110
INSDC AAO54045.1
NCBI Locus Tag PSPTO_0501
NCBI Old Locus Tag PSPTO0501
UniParc UPI000000846F
UniProtKB Acc Q88A91
UniProtKB ID Q88A91_PSESM
UniRef100 UniRef100_Q88A91
UniRef50 UniRef50_Q88A91
UniRef90 UniRef90_Q88A91

Product

Feature Type CDS
Coding Frame 1
Product Name
type III effector HopU1
Product Name Confidence: Class 1
Synonyms
Evidence for Translation
Charge (pH 7) -6.96
Kyte-Doolittle Hydrophobicity Value -0.493
Molecular Weight (kDa) 30.0
Isoelectric Point (pI) 6.04

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
3U0J TRANSFERASE 09/28/11 Crystal structure of ADP-ribosyltransferase HopU1 of Pseudomonas syringae pv. Tomato DC3000 PSEUDOMONAS SYRINGAE PV. TOMATO 2.7 X-RAY DIFFRACTION 100.0

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 3 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG017283 (1 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_0501
Search term: hopU1

Human Homologs

References

No references are associated with this feature.