Pseudomonas syringae pv. tomato DC3000, PSPTO_0503 (shcF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000
GCF_000007805.1|latest
Locus Tag
PSPTO_0503
NCBI Old Locus TagPSPTO0503
Name
shcF
Synonym: PSPTO0503
Replicon chromosome
Genomic location 550174 - 550569 (- strand)

Cross-References

RefSeq NP_790352.1
GI 28867733
Entrez 1182112
INSDC AAP83639.1
NCBI Locus Tag PSPTO_0503
NCBI Old Locus Tag PSPTO0503
UniParc UPI0000008471
UniProtKB Acc Q88A89
UniProtKB ID Q88A89_PSESM
UniRef100 UniRef100_Q88A89
UniRef50 UniRef50_Q9K2L2
UniRef90 UniRef90_Q88A89

Product

Feature Type CDS
Coding Frame 1
Product Name
type III chaperone protein ShcF
Synonyms
Evidence for Translation
Charge (pH 7) -0.56
Kyte-Doolittle Hydrophobicity Value -0.310
Molecular Weight (kDa) 15.3
Isoelectric Point (pI) 6.53

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Pathogenic
Found only in pathogenic strains
Hits to this gene were found in one genus

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG017285 (4 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_0503
Search term: shcF

Human Homologs

References

No references are associated with this feature.