Pseudomonas syringae pv. tomato DC3000, PSPTO_0909

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_0909
NCBI Old Locus Tag	PSPTO0909
Name	Synonym: PSPTO0909
Replicon	chromosome
Genomic location	990834 - 991340 (- strand)

Cross-References

RefSeq	NP_790748.1
GI	28868129
Entrez	1182538
INSDC	AAO54443.1
NCBI Locus Tag	PSPTO_0909
NCBI Old Locus Tag	PSPTO0909
UniParc	UPI00000085EF
UniProtKB Acc	Q888V7
UniProtKB ID	CHED_PSESM
UniRef100	UniRef100_Q888V7
UniRef50	UniRef50_Q48ND8
UniRef90	UniRef90_Q888V7

Product

Feature Type	CDS
Coding Frame	1
Product Name	chemoreceptor glutamine deamidase CheD
Synonyms
Evidence for Translation
Charge (pH 7)	5.81
Kyte-Doolittle Hydrophobicity Value	-0.437
Molecular Weight (kDa)	19.2
Isoelectric Point (pI)	9.27

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 219 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG017409 (53 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_0909 Search term: chemoreceptor glutamine deamidase CheD

Human Homologs

References