Pseudomonas syringae pv. tomato DC3000, PSPTO_0916

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_0916
NCBI Old Locus Tag	PSPTO0916
Name	Synonym: PSPTO0916
Replicon	chromosome
Genomic location	997260 - 998474 (- strand)

Cross-References

RefSeq	NP_790755.1
GI	28868136
Entrez	1182545
INSDC	AAO54450.1
NCBI Locus Tag	PSPTO_0916
NCBI Old Locus Tag	PSPTO0916
UniParc	UPI00000085F6
UniProtKB Acc	Q888V0
UniProtKB ID	Q888V0_PSESM
UniRef100	UniRef100_Q888V0
UniRef50	UniRef50_Q48ND1
UniRef90	UniRef90_Q888V0

Product

Feature Type	CDS
Coding Frame	1
Product Name	methyl-accepting chemotaxis protein
Synonyms
Evidence for Translation
Charge (pH 7)	-11.61
Kyte-Doolittle Hydrophobicity Value	-0.238
Molecular Weight (kDa)	43.6
Isoelectric Point (pI)	4.99

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown (This protein may have multiple localization sites) Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 393 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000178 (382 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_0916 Search term: methyl-accepting chemotaxis protein

Human Homologs

References