Pseudomonas syringae pv. tomato DC3000, PSPTO_0920

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_0920
NCBI Old Locus Tag	PSPTO0920
Name	Synonym: PSPTO0920
Replicon	chromosome
Genomic location	1000948 - 1001577 (- strand)

Cross-References

RefSeq	NP_790759.1
GI	28868140
Entrez	1182549
INSDC	AAO54454.1
NCBI Locus Tag	PSPTO_0920
NCBI Old Locus Tag	PSPTO0920
UniParc	UPI00000085FA
UniProtKB Acc	Q888U6
UniProtKB ID	Q888U6_PSESM
UniRef100	UniRef100_A0A038GGA4
UniRef50	UniRef50_Q9HVP2
UniRef90	UniRef90_Q4ZYC2

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	5.93
Kyte-Doolittle Hydrophobicity Value	-0.470
Molecular Weight (kDa)	24.2
Isoelectric Point (pI)	10.21

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 3 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004115 (497 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_0920

Human Homologs

References