Pseudomonas syringae pv. tomato DC3000, PSPTO_0921

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_0921
NCBI Old Locus Tag	PSPTO0921
Name	Synonym: PSPTO0921
Replicon	chromosome
Genomic location	1001589 - 1001720 (- strand)

Cross-References

RefSeq	NP_790760.1
GI	28868141
Entrez	1182550
INSDC	AAO54455.1
NCBI Locus Tag	PSPTO_0921
NCBI Old Locus Tag	PSPTO0921
UniParc	UPI00000085FB
UniProtKB Acc	Q888U5
UniProtKB ID	Q888U5_PSESM
UniRef100	UniRef100_Q888U5
UniRef50	UniRef50_Q888U5
UniRef90	UniRef90_Q888U5

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	3.22
Kyte-Doolittle Hydrophobicity Value	0.133
Molecular Weight (kDa)	4.9
Isoelectric Point (pI)	10.79

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Pathogenic Found only in pathogenic strains Hits to this gene were found in one genus

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG017413 (1 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_0921

Human Homologs

References