Pseudomonas syringae pv. tomato DC3000, PSPTO_0922

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_0922
NCBI Old Locus Tag	PSPTO0922
Name	Synonym: PSPTO0922
Replicon	chromosome
Genomic location	1002367 - 1002576 (- strand)

Cross-References

RefSeq	NP_790761.1
GI	28868142
Entrez	1182551
INSDC	AAO54456.1
NCBI Locus Tag	PSPTO_0922
NCBI Old Locus Tag	PSPTO0922
UniParc	UPI00000085FC
UniProtKB Acc	Q888U4
UniProtKB ID	YACG_PSESM
UniRef100	UniRef100_Q888U4
UniRef50	UniRef50_Q888U4
UniRef90	UniRef90_Q888U4

Product

Feature Type	CDS
Coding Frame	1
Product Name	hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7)	-7.41
Kyte-Doolittle Hydrophobicity Value	-0.484
Molecular Weight (kDa)	7.5
Isoelectric Point (pI)	4.19

Subcellular localization

Individual Mappings	Localization Confidence PMID Unknown Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 143 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004111 (524 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_0922

Human Homologs

References